IL_3JCT_088

3D structure

PDB id

3JCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-em structure of eukaryotic pre-60S ribosomal subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CUCU*AGUGAG

Length

10 nucleotides

Bulged bases

3JCT|1|1|G|2945, 3JCT|1|1|A|2946

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCT|1|1|C|2879
3JCT|1|1|U|2880
3JCT|1|1|C|2881
3JCT|1|1|U|2882
*
3JCT|1|1|A|2940
3JCT|1|1|G|2943
3JCT|1|1|U|2944
3JCT|1|1|G|2945
3JCT|1|1|A|2946
3JCT|1|1|G|2947

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain V

60S ribosomal protein L23-A

Chain b

Nucleolar GTP-binding protein 1