IL_3JCT_109
3D structure
- PDB id
- 3JCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-em structure of eukaryotic pre-60S ribosomal subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- CG*UUG
- Length
- 5 nucleotides
- Bulged bases
- 3JCT|1|1|U|3382
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCT_109 not in the Motif Atlas
- Homologous match to IL_5TBW_131
- Geometric discrepancy: 0.1363
- The information below is about IL_5TBW_131
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
3JCT|1|1|C|3324
3JCT|1|1|G|3325
*
3JCT|1|1|U|3381
3JCT|1|1|U|3382
3JCT|1|1|G|3383
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain d
- 60S ribosomal protein L31-A
Coloring options: