3D structure

PDB id
3JCT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-em structure of eukaryotic pre-60S ribosomal subunits
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
CUGAAUG*CGCG
Length
11 nucleotides
Bulged bases
3JCT|1|1|U|2205, 3JCT|1|1|A|2208, 3JCT|1|1|U|2209
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JCT|1|1|C|2204
3JCT|1|1|U|2205
3JCT|1|1|G|2206
3JCT|1|1|A|2207
3JCT|1|1|A|2208
3JCT|1|1|U|2209
3JCT|1|1|G|2210
*
3JCT|1|1|C|2235
3JCT|1|1|G|2236
3JCT|1|1|C|2237
3JCT|1|1|G|2238

Current chains

Chain 1
RDN25-1 rRNA

Nearby chains

Chain m
Nucleolar GTP-binding protein 2

Coloring options:

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