IL_3JD5_009
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- UG*CGCGGUCAUACGAUUA
- Length
- 18 nucleotides
- Bulged bases
- 3JD5|1|A|G|250, 3JD5|1|A|G|251, 3JD5|1|A|U|252, 3JD5|1|A|C|253, 3JD5|1|A|U|255
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|U|225
3JD5|1|A|G|226
*
3JD5|1|A|C|247
3JD5|1|A|G|248
3JD5|1|A|C|249
3JD5|1|A|G|250
3JD5|1|A|G|251
3JD5|1|A|U|252
3JD5|1|A|C|253
3JD5|1|A|A|254
3JD5|1|A|U|255
3JD5|1|A|A|256
3JD5|1|A|C|257
3JD5|1|A|G|258
3JD5|1|A|A|259
3JD5|1|A|U|260
3JD5|1|A|U|261
3JD5|1|A|A|262
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain E
- 28S ribosomal protein S5, mitochondrial
- Chain L
- 28S ribosomal protein S12, mitochondrial
- Chain i
- 28S ribosomal protein S33, mitochondrial
Coloring options: