IL_3JD5_029

3D structure

PDB id

3JD5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

CACCC*GACAAG

Length

11 nucleotides

Bulged bases

3JD5|1|A|C|910, 3JD5|1|A|A|911, 3JD5|1|A|A|912

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JD5|1|A|C|845
3JD5|1|A|A|846
3JD5|1|A|C|847
3JD5|1|A|C|848
3JD5|1|A|C|849
*
3JD5|1|A|G|908
3JD5|1|A|A|909
3JD5|1|A|C|910
3JD5|1|A|A|911
3JD5|1|A|A|912
3JD5|1|A|G|913

Current chains

Chain A

28S ribosomal RNA, mitochondial

Nearby chains

Chain L

28S ribosomal protein S12, mitochondrial

Chain n

Aurora kinase A interacting protein 1