IL_3JD5_033
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- UUAAAUUCUAACUAAGC*GCCAUGAUUAAAAUAAAAAUAAAUGACGAAAGUGA
- Length
- 52 nucleotides
- Bulged bases
- 3JD5|1|A|A|321, 3JD5|1|A|A|347, 3JD5|1|A|A|360, 3JD5|1|A|A|366
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|U|319
3JD5|1|A|U|320
3JD5|1|A|A|321
3JD5|1|A|A|322
3JD5|1|A|A|323
3JD5|1|A|U|324
3JD5|1|A|U|325
3JD5|1|A|C|326
3JD5|1|A|U|327
3JD5|1|A|A|328
3JD5|1|A|A|329
3JD5|1|A|C|330
3JD5|1|A|U|331
3JD5|1|A|A|332
3JD5|1|A|A|333
3JD5|1|A|G|334
3JD5|1|A|C|335
*
3JD5|1|A|G|344
3JD5|1|A|C|345
3JD5|1|A|C|346
3JD5|1|A|A|347
3JD5|1|A|U|348
3JD5|1|A|G|349
3JD5|1|A|A|350
3JD5|1|A|U|351
3JD5|1|A|U|352
3JD5|1|A|A|353
3JD5|1|A|A|354
3JD5|1|A|A|355
3JD5|1|A|A|356
3JD5|1|A|U|357
3JD5|1|A|A|358
3JD5|1|A|A|359
3JD5|1|A|A|360
3JD5|1|A|A|361
3JD5|1|A|A|362
3JD5|1|A|U|363
3JD5|1|A|A|364
3JD5|1|A|A|365
3JD5|1|A|A|366
3JD5|1|A|U|367
3JD5|1|A|G|368
3JD5|1|A|A|369
3JD5|1|A|C|370
3JD5|1|A|G|371
3JD5|1|A|A|372
3JD5|1|A|A|373
3JD5|1|A|A|374
3JD5|1|A|G|375
3JD5|1|A|U|376
3JD5|1|A|G|377
3JD5|1|A|A|378
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain F
- 28S ribosomal protein S6, mitochondrial
- Chain K
- 28S ribosomal protein S11, mitochondrial
- Chain O
- 28S ribosomal protein S15, mitochondrial
- Chain R
- 28S ribosomal protein S18c, mitochondrial
- Chain U
- 28S ribosomal protein S21, mitochondrial
- Chain m
- Coiled-coil-helix-coiled-coil-helix domain containing 1
Coloring options: