IL_3JD5_039
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- GUCUAUAUACCG*UCAAGGUGUAAC
- Length
- 24 nucleotides
- Bulged bases
- 3JD5|1|A|U|609
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|G|602
3JD5|1|A|U|603
3JD5|1|A|C|604
3JD5|1|A|U|605
3JD5|1|A|A|606
3JD5|1|A|U|607
3JD5|1|A|A|608
3JD5|1|A|U|609
3JD5|1|A|A|610
3JD5|1|A|C|611
3JD5|1|A|C|612
3JD5|1|A|G|613
*
3JD5|1|A|U|679
3JD5|1|A|C|680
3JD5|1|A|A|681
3JD5|1|A|A|682
3JD5|1|A|G|683
3JD5|1|A|G|684
3JD5|1|A|U|685
3JD5|1|A|G|686
3JD5|1|A|U|687
3JD5|1|A|A|688
3JD5|1|A|A|689
3JD5|1|A|C|690
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain C
- 28S ribosomal protein S24, mitochondrial
- Chain E
- 28S ribosomal protein S5, mitochondrial
- Chain J
- 28S ribosomal protein S10, mitochondrial
- Chain N
- 28S ribosomal protein S14, mitochondrial
- Chain i
- 28S ribosomal protein S33, mitochondrial
Coloring options: