IL_3JYV_073
3D structure
- PDB id
- 3JYV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 40S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.9 Å
Loop
- Sequence
- GUCUAA*UAAUC
- Length
- 11 nucleotides
- Bulged bases
- 3JYV|1|A|U|1489, 3JYV|1|A|A|1490, 3JYV|1|A|U|1515
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JYV|1|A|G|1486
3JYV|1|A|U|1487
3JYV|1|A|C|1488
3JYV|1|A|U|1489
3JYV|1|A|A|1490
3JYV|1|A|A|1491
*
3JYV|1|A|U|1512
3JYV|1|A|A|1513
3JYV|1|A|A|1514
3JYV|1|A|U|1515
3JYV|1|A|C|1516
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain C
- 40S ribosomal protein S3
- Chain J
- 40S ribosomal protein S20
- Chain N
- 40S ribosomal protein S29(A)
- Chain T
- s19e protein
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