IL_3MOJ_001

3D structure

PDB id

3MOJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RNA binding domain of the Bacillus subtilis YxiN protein complexed with a fragment of 23S ribosomal RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCUCA*UAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31890.1

Basepair signature

cWW-L-R-L-R-L-R-L

Number of instances in this motif group

1

Unit IDs

3MOJ|1|A|G|2509
3MOJ|1|A|C|2510
3MOJ|1|A|U|2511
3MOJ|1|A|C|2512
3MOJ|1|A|A|2513
*
3MOJ|1|A|U|2571
3MOJ|1|A|A|2577
3MOJ|1|A|G|2578
3MOJ|1|A|C|2579

Current chains

Chain A

RNA (69-MER)

Nearby chains

Chain B

ATP-dependent RNA helicase dbpA