IL_3MOJ_004

3D structure

PDB id

3MOJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RNA binding domain of the Bacillus subtilis YxiN protein complexed with a fragment of 23S ribosomal RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UG*CAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_11389.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

22

Unit IDs

3MOJ|1|A|U|2522
3MOJ|1|A|G|2523
*
3MOJ|1|A|C|2540
3MOJ|1|A|A|2541
3MOJ|1|A|A|2542

Current chains

Chain A

RNA (69-MER)

Nearby chains