IL_3NMU_003

3D structure

PDB id

3NMU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of substrate-bound halfmer box C/D RNP

Experimental method

X-RAY DIFFRACTION

Resolution

2.73 Å

Loop

Sequence

CUGAC*GCGUGAUG

Length

13 nucleotides

Bulged bases

3NMU|1|D|U|27

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_98536.1

Basepair signature

cWW-tSS-L-tSH-tHS-cWW-cWW

Number of instances in this motif group

3

Unit IDs

3NMU|1|D|C|13
3NMU|1|D|U|14
3NMU|1|D|G|15
3NMU|1|D|A|16
3NMU|1|D|C|17
*
3NMU|1|D|G|24
3NMU|1|D|C|25
3NMU|1|D|G|26
3NMU|1|D|U|27
3NMU|1|D|G|28
3NMU|1|D|A|29
3NMU|1|D|U|30
3NMU|1|D|G|31

Current chains

Chain D

RNA (34-MER)

Nearby chains

Chain A

NOP5/NOP56 related protein

Chain F

Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase

Chain G

50S ribosomal protein L7Ae