IL_3NPB_003

3D structure

PDB id

3NPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

TL5 RNA structure

Experimental method

X-RAY DIFFRACTION

Resolution

3.02 Å

Loop

Sequence

CAGAG*CGACGAAG

Length

13 nucleotides

Bulged bases

3NPB|1|A|C|34

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65553.6

Basepair signature

cWW-cSS-tSS-L-tSH-tSS-tHS-tHW-cWW-tHS-cWW

Number of instances in this motif group

22

Unit IDs

3NPB|1|A|C|17
3NPB|1|A|A|18
3NPB|1|A|G|19
3NPB|1|A|A|20
3NPB|1|A|G|21
*
3NPB|1|A|C|31
3NPB|1|A|G|32
3NPB|1|A|A|33
3NPB|1|A|C|34
3NPB|1|A|G|35
3NPB|1|A|A|36
3NPB|1|A|A|37
3NPB|1|A|G|38

Current chains

Chain A

TL5 RNA

Nearby chains