IL_3NVI_002
3D structure
- PDB id
- 3NVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of N-terminal truncated Nop56/58 bound with L7Ae and box C/D RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.71 Å
Loop
- Sequence
- CUGAC*GCGUGAUG
- Length
- 13 nucleotides
- Bulged bases
- 3NVI|1|F|U|18
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_69229.1
- Basepair signature
- cWW-tSS-tSH-L-tHS-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
3NVI|1|F|C|4
3NVI|1|F|U|5
3NVI|1|F|G|6
3NVI|1|F|A|7
3NVI|1|F|C|8
*
3NVI|1|F|G|15
3NVI|1|F|C|16
3NVI|1|F|G|17
3NVI|1|F|U|18
3NVI|1|F|G|19
3NVI|1|F|A|20
3NVI|1|F|U|21
3NVI|1|F|G|22
Current chains
- Chain F
- RNA (5'-R(*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3')
Nearby chains
- Chain C
- NOP5/NOP56 related protein
- Chain D
- 50S ribosomal protein L7Ae
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