IL_3O30_011

3D structure

PDB id

3O30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 40S subunit of the second 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UUAUUU*AUUCA

Length

11 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86121.1

Basepair signature

Not available

Number of instances in this motif group

4

Unit IDs

3O30|1|1|U|117
3O30|1|1|U|118
3O30|1|1|A|119
3O30|1|1|U|120
3O30|1|1|U|121
3O30|1|1|U|122
*
3O30|1|1|A|295
3O30|1|1|U|296
3O30|1|1|U|297
3O30|1|1|C|298
3O30|1|1|A|299

Current chains

Chain 1

18S ribosomal RNA

Nearby chains