IL_3O30_043

3D structure

PDB id

3O30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 40S subunit of the second 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UUGGUUC*GGACCA

Length

13 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36331.1

Basepair signature

Not available

Number of instances in this motif group

1

Unit IDs

3O30|1|1|U|821
3O30|1|1|U|822
3O30|1|1|G|823
3O30|1|1|G|824
3O30|1|1|U|825
3O30|1|1|U|826
3O30|1|1|C|827
*
3O30|1|1|G|845
3O30|1|1|G|846
3O30|1|1|A|847
3O30|1|1|C|848
3O30|1|1|C|849
3O30|1|1|A|850

Current chains

Chain 1

18S ribosomal RNA

Nearby chains