IL_3O30_085

3D structure

PDB id

3O30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 40S subunit of the second 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76795.1

Basepair signature

Not available

Number of instances in this motif group

4

Unit IDs

3O30|1|1|C|1644
3O30|1|1|G|1645
3O30|1|1|C|1646
3O30|1|1|U|1647
*
3O30|1|1|A|1753
3O30|1|1|A|1754
3O30|1|1|A|1755
3O30|1|1|A|1756
3O30|1|1|G|1757

Current chains

Chain 1

18S ribosomal RNA

Nearby chains

Chain P

40S ribosomal protein S23