IL_3O58_018
3D structure
- PDB id
- 3O58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 3O58|1|1|A|398, 3O58|1|1|A|402
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_63624.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 1
Unit IDs
3O58|1|1|G|376
3O58|1|1|A|377
3O58|1|1|A|378
3O58|1|1|C|379
*
3O58|1|1|G|390
3O58|1|1|A|391
3O58|1|1|G|392
3O58|1|1|U|393
3O58|1|1|G|394
3O58|1|1|A|395
3O58|1|1|A|396
3O58|1|1|A|397
3O58|1|1|A|398
3O58|1|1|A|399
3O58|1|1|G|400
3O58|1|1|U|401
3O58|1|1|A|402
3O58|1|1|C|403
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Q
- 60S ribosomal protein L17-A
- Chain X
- 60S ribosomal protein L26-A
- Chain e
- 60S ribosomal protein L39
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