IL_3O58_041
3D structure
- PDB id
- 3O58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 3O58|1|1|A|933, 3O58|1|1|G|937
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_79119.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 1
Unit IDs
3O58|1|1|G|805
3O58|1|1|A|806
3O58|1|1|A|807
3O58|1|1|A|808
3O58|1|1|G|809
*
3O58|1|1|C|931
3O58|1|1|U|932
3O58|1|1|A|933
3O58|1|1|G|934
3O58|1|1|U|935
3O58|1|1|A|936
3O58|1|1|G|937
3O58|1|1|C|938
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L4-A
- Chain O
- 60S ribosomal protein L15-A
- Chain Y
- 60S ribosomal protein L28
- Chain d
- 60S ribosomal protein L37-A
Coloring options: