IL_3OKB_006

3D structure

PDB id

3OKB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a bacterial RNase P holoenzyme in complex with tRNA and in the presence of 5' leader

Experimental method

X-RAY DIFFRACTION

Resolution

4.21 Å

Loop

Sequence

AGC*GGCU

Length

7 nucleotides

Bulged bases

3OKB|1|B|C|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OKB_006 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.2123

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

3OKB|1|B|A|179
3OKB|1|B|G|180
3OKB|1|B|C|181
*
3OKB|1|B|G|198
3OKB|1|B|G|199
3OKB|1|B|C|200
3OKB|1|B|U|201

Current chains

Chain B

RNase P RNA

Nearby chains