IL_3OTO_077

3D structure

PDB id

3OTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)

Experimental method

X-RAY DIFFRACTION

Resolution

3.69 Å

Loop

Sequence

CACGCCAU*GGGGCGAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3OTO|1|A|C|1407
3OTO|1|A|A|1408
3OTO|1|A|C|1409
3OTO|1|A|G|1410
3OTO|1|A|C|1411
3OTO|1|A|C|1412
3OTO|1|A|A|1413
3OTO|1|A|U|1414
*
3OTO|1|A|G|1486
3OTO|1|A|G|1487
3OTO|1|A|G|1488
3OTO|1|A|G|1489
3OTO|1|A|C|1490
3OTO|1|A|G|1491
3OTO|1|A|A|1492
3OTO|1|A|A|1493
3OTO|1|A|G|1494

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S RIBOSOMAL PROTEIN S12