IL_3OTO_078

3D structure

PDB id

3OTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)

Experimental method

X-RAY DIFFRACTION

Resolution

3.69 Å

Loop

Sequence

UGGGAGCGGG*CCCGUGACUG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3OTO|1|A|U|1414
3OTO|1|A|G|1415
3OTO|1|A|G|1416
3OTO|1|A|G|1417
3OTO|1|A|A|1418
3OTO|1|A|G|1419
3OTO|1|A|C|1420
3OTO|1|A|G|1421
3OTO|1|A|G|1422
3OTO|1|A|G|1423
*
3OTO|1|A|C|1477
3OTO|1|A|C|1478
3OTO|1|A|C|1479
3OTO|1|A|G|1480
3OTO|1|A|U|1481
3OTO|1|A|G|1482
3OTO|1|A|A|1483
3OTO|1|A|C|1484
3OTO|1|A|U|1485
3OTO|1|A|G|1486

Current chains

Chain A

16S rRNA

Nearby chains