IL_3OTO_079

3D structure

PDB id

3OTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)

Experimental method

X-RAY DIFFRACTION

Resolution

3.69 Å

Loop

Sequence

GGGACG*CGGUACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3OTO|1|A|G|445
3OTO|1|A|G|446
3OTO|1|A|G|447
3OTO|1|A|A|448
3OTO|1|A|C|449
3OTO|1|A|G|450
*
3OTO|1|A|C|483
3OTO|1|A|G|484
3OTO|1|A|G|485
3OTO|1|A|U|486
3OTO|1|A|A|487
3OTO|1|A|C|488
3OTO|1|A|C|489

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S RIBOSOMAL PROTEIN S4

Chain P

30S RIBOSOMAL PROTEIN S16