IL_3OTO_081
3D structure
- PDB id
- 3OTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- UUAGUUGCCAGCG*CGGGCACUCUAA
- Length
- 25 nucleotides
- Bulged bases
- 3OTO|1|A|U|1125, 3OTO|1|A|U|1126, 3OTO|1|A|G|1127
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3OTO|1|A|U|1121
3OTO|1|A|U|1122
3OTO|1|A|A|1123
3OTO|1|A|G|1124
3OTO|1|A|U|1125
3OTO|1|A|U|1126
3OTO|1|A|G|1127
3OTO|1|A|C|1128
3OTO|1|A|C|1129
3OTO|1|A|A|1130
3OTO|1|A|G|1131
3OTO|1|A|C|1132
3OTO|1|A|G|1133
*
3OTO|1|A|C|1141
3OTO|1|A|G|1142
3OTO|1|A|G|1143
3OTO|1|A|G|1144
3OTO|1|A|C|1145
3OTO|1|A|A|1146
3OTO|1|A|C|1147
3OTO|1|A|U|1148
3OTO|1|A|C|1149
3OTO|1|A|U|1150
3OTO|1|A|A|1151
3OTO|1|A|A|1152
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- 30S RIBOSOMAL PROTEIN S9
- Chain J
- 30S RIBOSOMAL PROTEIN S10
Coloring options: