IL_3OTO_082
3D structure
- PDB id
- 3OTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.69 Å
Loop
- Sequence
- GAUGCCAC*GGAGCUAAUC
- Length
- 18 nucleotides
- Bulged bases
- 3OTO|1|A|A|1256, 3OTO|1|A|U|1257, 3OTO|1|A|U|1278, 3OTO|1|A|A|1280, 3OTO|1|A|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3OTO|1|A|G|1255
3OTO|1|A|A|1256
3OTO|1|A|U|1257
3OTO|1|A|G|1258
3OTO|1|A|C|1259
3OTO|1|A|C|1260
3OTO|1|A|A|1261
3OTO|1|A|C|1262
*
3OTO|1|A|G|1273
3OTO|1|A|G|1274
3OTO|1|A|A|1275
3OTO|1|A|G|1276
3OTO|1|A|C|1277
3OTO|1|A|U|1278
3OTO|1|A|A|1279
3OTO|1|A|A|1280
3OTO|1|A|U|1281
3OTO|1|A|C|1282
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
- Chain U
- 30S RIBOSOMAL PROTEIN THX
Coloring options: