IL_3OW2_007

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UUAGUAA*UGAACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_007 not in the Motif Atlas

Homologous match to IL_4V9F_007

Geometric discrepancy: 0.0412

The information below is about IL_4V9F_007

Detailed Annotation

7x6 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_26307.2

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

9

Unit IDs

3OW2|1|0|U|210
3OW2|1|0|U|211
3OW2|1|0|A|212
3OW2|1|0|G|213
3OW2|1|0|U|214
3OW2|1|0|A|215
3OW2|1|0|A|216
*
3OW2|1|0|U|224
3OW2|1|0|G|225
3OW2|1|0|A|226
3OW2|1|0|A|227
3OW2|1|0|C|228
3OW2|1|0|G|229

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain K

50S ribosomal protein L15P

Chain L

50S ribosomal protein L15e