IL_3OW2_008

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGAA*UG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_008 not in the Motif Atlas

Homologous match to IL_4V9F_008

Geometric discrepancy: 0.058

The information below is about IL_4V9F_008

Detailed Annotation

Major groove platform; stack outside cWW

Broad Annotation

No text annotation

Motif group

IL_74641.2

Basepair signature

cWW-tSH-cWW-L

Number of instances in this motif group

33

Unit IDs

3OW2|1|0|C|245
3OW2|1|0|G|246
3OW2|1|0|A|247
3OW2|1|0|A|248
*
3OW2|1|0|U|265
3OW2|1|0|G|266

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain F

50S ribosomal protein L7Ae

Chain L

50S ribosomal protein L15e