IL_3OW2_011

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CUCUCAUC*GUGCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_011 not in the Motif Atlas

Homologous match to IL_4V9F_011

Geometric discrepancy: 0.4443

The information below is about IL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22028.1

Basepair signature

cWW-L-R-L-R-L-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

3OW2|1|0|C|280
3OW2|1|0|U|281
3OW2|1|0|C|282
3OW2|1|0|U|283
3OW2|1|0|C|284
3OW2|1|0|A|285
3OW2|1|0|U|286
3OW2|1|0|C|287
*
3OW2|1|0|G|365
3OW2|1|0|U|366
3OW2|1|0|G|367
3OW2|1|0|C|368
3OW2|1|0|G|369

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain L

50S ribosomal protein L15e