IL_3OW2_015

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUACC*GAGGCGAAAUAGAGC

Length

20 nucleotides

Bulged bases

3OW2|1|0|U|510, 3OW2|1|0|G|514

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_015 not in the Motif Atlas

Geometric match to IL_4V9F_014

Geometric discrepancy: 0.0943

The information below is about IL_4V9F_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31504.1

Basepair signature

cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|G|487
3OW2|1|0|U|488
3OW2|1|0|A|489
3OW2|1|0|C|490
3OW2|1|0|C|491
*
3OW2|1|0|G|501
3OW2|1|0|A|502
3OW2|1|0|G|503
3OW2|1|0|G|504
3OW2|1|0|C|505
3OW2|1|0|G|506
3OW2|1|0|A|507
3OW2|1|0|A|508
3OW2|1|0|A|509
3OW2|1|0|U|510
3OW2|1|0|A|511
3OW2|1|0|G|512
3OW2|1|0|A|513
3OW2|1|0|G|514
3OW2|1|0|C|515

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L39e

Chain Q

50S ribosomal protein L22P

Chain S

50S ribosomal protein L24P