3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
GUACC*GAGGCGAAAUAGAGC
Length
20 nucleotides
Bulged bases
3OW2|1|0|U|510, 3OW2|1|0|G|514
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3OW2_015 not in the Motif Atlas
Geometric match to IL_4V9F_014
Geometric discrepancy: 0.0943
The information below is about IL_4V9F_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_31504.1
Basepair signature
cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
Number of instances in this motif group
1

Unit IDs

3OW2|1|0|G|487
3OW2|1|0|U|488
3OW2|1|0|A|489
3OW2|1|0|C|490
3OW2|1|0|C|491
*
3OW2|1|0|G|501
3OW2|1|0|A|502
3OW2|1|0|G|503
3OW2|1|0|G|504
3OW2|1|0|C|505
3OW2|1|0|G|506
3OW2|1|0|A|507
3OW2|1|0|A|508
3OW2|1|0|A|509
3OW2|1|0|U|510
3OW2|1|0|A|511
3OW2|1|0|G|512
3OW2|1|0|A|513
3OW2|1|0|G|514
3OW2|1|0|C|515

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 1
50S ribosomal protein L39e
Chain Q
50S ribosomal protein L22P
Chain S
50S ribosomal protein L24P

Coloring options:


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