3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
GAAUC*GCAACAGC
Length
13 nucleotides
Bulged bases
3OW2|1|0|A|894, 3OW2|1|0|G|898
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3OW2_025 not in the Motif Atlas
Geometric match to IL_4V9F_024
Geometric discrepancy: 0.0511
The information below is about IL_4V9F_024
Detailed Annotation
tHW-tHW cross-strand stack
Broad Annotation
No text annotation
Motif group
IL_54041.2
Basepair signature
cWW-L-R-L-R-tWH-L-cWW
Number of instances in this motif group
7

Unit IDs

3OW2|1|0|G|765
3OW2|1|0|A|766
3OW2|1|0|A|767
3OW2|1|0|U|768
3OW2|1|0|C|769
*
3OW2|1|0|G|892
3OW2|1|0|C|893
3OW2|1|0|A|894
3OW2|1|0|A|895
3OW2|1|0|C|896
3OW2|1|0|A|897
3OW2|1|0|G|898
3OW2|1|0|C|899

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain C
50S ribosomal protein L4P
Chain K
50S ribosomal protein L15P
Chain L
50S ribosomal protein L15e
Chain Z
50S ribosomal protein L37e

Coloring options:


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