IL_3OW2_038

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UUAAG*CGAGA

Length

10 nucleotides

Bulged bases

3OW2|1|0|G|1260

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_038 not in the Motif Atlas

Homologous match to IL_4V9F_037

Geometric discrepancy: 0.0375

The information below is about IL_4V9F_037

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

22

Unit IDs

3OW2|1|0|U|1095
3OW2|1|0|U|1096
3OW2|1|0|A|1097
3OW2|1|0|A|1098
3OW2|1|0|G|1099
*
3OW2|1|0|C|1257
3OW2|1|0|G|1258
3OW2|1|0|A|1259
3OW2|1|0|G|1260
3OW2|1|0|A|1261

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 9

5S ribosomal RNA; 5S rRNA

Chain V

50S ribosomal protein L30P

Chain X

50S ribosomal protein L32e