IL_3OW2_052

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GCACU*AGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_052 not in the Motif Atlas

Homologous match to IL_4V9F_051

Geometric discrepancy: 0.0658

The information below is about IL_4V9F_051

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

3OW2|1|0|G|1425
3OW2|1|0|C|1426
3OW2|1|0|A|1427
3OW2|1|0|C|1428
3OW2|1|0|U|1429
*
3OW2|1|0|A|1437
3OW2|1|0|G|1438
3OW2|1|0|C|1439

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L39e

Chain O

50S ribosomal protein L19e

Chain Q

50S ribosomal protein L22P