IL_3OW2_063

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

AUUCGG*CUGU

Length

10 nucleotides

Bulged bases

3OW2|1|0|G|2033

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_063 not in the Motif Atlas

Geometric match to IL_4V9F_062

Geometric discrepancy: 0.0657

The information below is about IL_4V9F_062

Detailed Annotation

Intercalated tWH

Broad Annotation

Intercalated tWH

Motif group

IL_28217.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

3OW2|1|0|A|1747
3OW2|1|0|U|1748
3OW2|1|0|U|1749
3OW2|1|0|C|1750
3OW2|1|0|G|1751
3OW2|1|0|G|1752
*
3OW2|1|0|C|2031
3OW2|1|0|U|2032
3OW2|1|0|G|2033
3OW2|1|0|U|2034

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain J

50S ribosomal protein L14P