3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
GUG*CC
Length
5 nucleotides
Bulged bases
3OW2|1|9|U|3087
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3OW2_106 not in the Motif Atlas
Homologous match to IL_4V9F_107
Geometric discrepancy: 0.0585
The information below is about IL_4V9F_107
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
117

Unit IDs

3OW2|1|9|G|3086
3OW2|1|9|U|3087
3OW2|1|9|G|3088
*
3OW2|1|9|C|3095
3OW2|1|9|C|3096

Current chains

Chain 9
5S RIBOSOMAL RNA

Nearby chains

Chain 0
Large subunit ribosomal RNA; LSU rRNA
Chain H
50S ribosomal protein L10e
Chain V
50S ribosomal protein L30P

Coloring options:


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