IL_3OW2_111

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGAAUUCGG*CUGUC

Length

14 nucleotides

Bulged bases

3OW2|1|0|G|2033

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_111 not in the Motif Atlas

Homologous match to IL_4V9F_111

Geometric discrepancy: 0.0509

The information below is about IL_4V9F_111

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

3OW2|1|0|G|1744
3OW2|1|0|G|1745
3OW2|1|0|A|1746
3OW2|1|0|A|1747
3OW2|1|0|U|1748
3OW2|1|0|U|1749
3OW2|1|0|C|1750
3OW2|1|0|G|1751
3OW2|1|0|G|1752
*
3OW2|1|0|C|2031
3OW2|1|0|U|2032
3OW2|1|0|G|2033
3OW2|1|0|U|2034
3OW2|1|0|C|2035

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain J

50S ribosomal protein L14P