IL_3P22_001
3D structure
- PDB id
- 3P22 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the ENE, a viral RNA stability element, in complex with A9 RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GUUUUUC*GUUUUUAUC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31915.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
3P22|1|A|G|7
3P22|1|A|U|8
3P22|1|A|U|9
3P22|1|A|U|10
3P22|1|A|U|11
3P22|1|A|U|12
3P22|1|A|C|13
*
3P22|1|A|G|26
3P22|1|A|U|27
3P22|1|A|U|28
3P22|1|A|U|29
3P22|1|A|U|30
3P22|1|A|U|31
3P22|1|A|A|32
3P22|1|A|U|33
3P22|1|A|C|34
Current chains
- Chain A
- Core ENE hairpin from KSHV PAN RNA
Nearby chains
- Chain B
- oligo(A)9 RNA
- Chain E
- Core ENE hairpin from KSHV PAN RNA
- Chain F
- oligo(A)9 RNA
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