IL_3PIP_069
3D structure
- PDB id
- 3PIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- ACUUUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 3PIP|1|X|G|1975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3PIP_069 not in the Motif Atlas
- Homologous match to IL_7A0S_062
- Geometric discrepancy: 0.1784
- The information below is about IL_7A0S_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
3PIP|1|X|A|1686
3PIP|1|X|C|1687
3PIP|1|X|U|1688
3PIP|1|X|U|1689
3PIP|1|X|U|1690
3PIP|1|X|G|1691
*
3PIP|1|X|C|1973
3PIP|1|X|U|1974
3PIP|1|X|G|1975
3PIP|1|X|U|1976
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain H
- 50S ribosomal protein L14
Coloring options: