IL_3PYO_013
3D structure
- PDB id
- 3PYO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome. This file contains the 50S subunit of the first 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 3PYO|1|A|U|504, 3PYO|1|A|G|508
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68345.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 3
Unit IDs
3PYO|1|A|G|481
3PYO|1|A|A|482
3PYO|1|A|A|483
3PYO|1|A|C|484
*
3PYO|1|A|G|496
3PYO|1|A|A|497
3PYO|1|A|G|498
3PYO|1|A|U|499
3PYO|1|A|G|500
3PYO|1|A|A|501
3PYO|1|A|A|502
3PYO|1|A|A|503
3PYO|1|A|U|504
3PYO|1|A|A|505
3PYO|1|A|G|506
3PYO|1|A|A|507
3PYO|1|A|G|508
3PYO|1|A|C|509
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
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