IL_3PYO_038
3D structure
- PDB id
- 3PYO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome. This file contains the 50S subunit of the first 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAAGUG*CUUAAG
- Length
- 13 nucleotides
- Bulged bases
- 3PYO|1|A|U|1142, 3PYO|1|A|A|1143
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10326.2
- Basepair signature
- Not available
- Number of instances in this motif group
- 3
Unit IDs
3PYO|1|A|C|1018
3PYO|1|A|U|1019
3PYO|1|A|A|1020
3PYO|1|A|A|1021
3PYO|1|A|G|1022
3PYO|1|A|U|1023
3PYO|1|A|G|1024
*
3PYO|1|A|C|1140
3PYO|1|A|U|1141
3PYO|1|A|U|1142
3PYO|1|A|A|114|||B
3PYO|1|A|A|1143
3PYO|1|A|G|1144
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
Coloring options: