IL_3PYO_045
3D structure
- PDB id
- 3PYO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome. This file contains the 50S subunit of the first 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55276.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 6
Unit IDs
3PYO|1|A|A|1262
3PYO|1|A|U|1263
3PYO|1|A|G|1264
3PYO|1|A|A|1265
3PYO|1|A|G|1266
3PYO|1|A|U|1267
3PYO|1|A|A|1268
3PYO|1|A|A|1269
*
3PYO|1|A|U|2011
3PYO|1|A|G|2012
3PYO|1|A|A|2013
3PYO|1|A|A|2014
3PYO|1|A|A|2015
3PYO|1|A|U|2016
3PYO|1|A|U|2017
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain N
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
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