IL_3Q1R_001

3D structure

PDB id

3Q1R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a bacterial RNase P holoenzyme in complex with TRNA and in the presence of 5' leader

Experimental method

X-RAY DIFFRACTION

Resolution

4.21 Å

Loop

Sequence

GUC*GC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3Q1R_001 not in the Motif Atlas

Geometric match to IL_5Y85_005

Geometric discrepancy: 0.1804

The information below is about IL_5Y85_005

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.8

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

3Q1R|1|B|G|51
3Q1R|1|B|U|52
3Q1R|1|B|C|53
*
3Q1R|1|B|G|328
3Q1R|1|B|C|329

Current chains

Chain B

RNase P RNA

Nearby chains

Chain A

Ribonuclease P protein component

Chain C

Transfer RNA; tRNA

Chain D

TRNA 5' LEADER