IL_3Q1R_009

3D structure

PDB id

3Q1R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a bacterial RNase P holoenzyme in complex with TRNA and in the presence of 5' leader

Experimental method

X-RAY DIFFRACTION

Resolution

4.21 Å

Loop

Sequence

UAUG*CUAAG

Length

9 nucleotides

Bulged bases

3Q1R|1|C|U|34

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3Q1R_009 not in the Motif Atlas

Geometric match to IL_1NBS_008

Geometric discrepancy: 0.2049

The information below is about IL_1NBS_008

Detailed Annotation

Receptor of 11-nt loop-receptor motif

Broad Annotation

Loop-receptor motif

Motif group

IL_87739.1

Basepair signature

cWW-tWH-cSH-cWW

Number of instances in this motif group

10

Unit IDs

3Q1R|1|C|U|32
3Q1R|1|C|A|33
3Q1R|1|C|U|34
3Q1R|1|C|G|35
*
3Q1R|1|C|C|44
3Q1R|1|C|U|45
3Q1R|1|C|A|46
3Q1R|1|C|A|47
3Q1R|1|C|G|48

Current chains

Chain C

TRNA (PHE)

Nearby chains