IL_3T1H_043
3D structure
- PDB id
- 3T1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.11 Å
Loop
- Sequence
- AGG*CCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: AGG,CCU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3T1H_043 not in the Motif Atlas
- Geometric match to IL_5TBW_112
- Geometric discrepancy: 0.244
- The information below is about IL_5TBW_112
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
3T1H|1|A|A|978
3T1H|1|A|G|979
3T1H|1|A|G|980
*
3T1H|1|A|C|1020
3T1H|1|A|C|1021
3T1H|1|A|U|1022
Current chains
- Chain A
- 16s rRNA
Nearby chains
No other chains within 10ÅColoring options: