IL_3T1H_067

3D structure

PDB id

3T1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GGGAGC*GUGACU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3T1H|1|A|G|1397
3T1H|1|A|G|1398
3T1H|1|A|G|1399
3T1H|1|A|A|1400
3T1H|1|A|G|1401
3T1H|1|A|C|1402
*
3T1H|1|A|G|1457
3T1H|1|A|U|1458
3T1H|1|A|G|1459
3T1H|1|A|A|1460
3T1H|1|A|C|1461
3T1H|1|A|U|1462

Current chains

Chain A

16s rRNA

Nearby chains