IL_3T1H_069

3D structure

PDB id

3T1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GAUG*CUAAUC

Length

10 nucleotides

Bulged bases

3T1H|1|A|U|1238, 3T1H|1|A|A|1261, 3T1H|1|A|U|1262

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3T1H|1|A|G|1236
3T1H|1|A|A|1237
3T1H|1|A|U|1238
3T1H|1|A|G|1239
*
3T1H|1|A|C|1258
3T1H|1|A|U|1259
3T1H|1|A|A|1260
3T1H|1|A|A|1261
3T1H|1|A|U|1262
3T1H|1|A|C|1263

Current chains

Chain A

16s rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14 type Z