IL_3U4M_001

3D structure

PDB id

3U4M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

2 Å

Loop

Sequence

AUG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

3U4M|1|B|A|2108
3U4M|1|B|U|2109
3U4M|1|B|G|2110
*
3U4M|1|B|C|2179
3U4M|1|B|U|2180
3U4M|1|B|U|2181

Current chains

Chain B

RNA (80-MER)

Nearby chains

Chain A

50S ribosomal protein L1