IL_3U4M_004

3D structure

PDB id

3U4M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

2 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

3U4M|1|B|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

3U4M|1|B|C|2129
3U4M|1|B|U|2130
3U4M|1|B|G|2131
3U4M|1|B|U|2132
3U4M|1|B|G|2133
3U4M|1|B|A|2134
3U4M|1|B|A|2135
3U4M|1|B|C|2136
*
3U4M|1|B|G|2155
3U4M|1|B|G|2156
3U4M|1|B|G|2157
3U4M|1|B|A|2158
3U4M|1|B|G|2159

Current chains

Chain B

RNA (80-MER)

Nearby chains

Chain A

50S ribosomal protein L1