3D structure

PDB id
3U5F (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 40S subunit, ribosome B
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UUUCGA*UG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_32508.1
Basepair signature
cWW-L-L-cWW
Number of instances in this motif group
4

Unit IDs

3U5F|1|6|U|318
3U5F|1|6|U|319
3U5F|1|6|U|320
3U5F|1|6|C|321
3U5F|1|6|G|322
3U5F|1|6|A|323
*
3U5F|1|6|U|345
3U5F|1|6|G|346

Current chains

Chain 6
18S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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