IL_3U5F_051

3D structure

PDB id

3U5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 40S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUCAG*CUUGGAUU

Length

13 nucleotides

Bulged bases

3U5F|1|6|G|913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65553.12

Basepair signature

cWW-cSS-tSS-L-tSH-tSS-tHS-tHW-cWW-tHS-cWW

Number of instances in this motif group

29

Unit IDs

3U5F|1|6|G|895
3U5F|1|6|U|896
3U5F|1|6|C|897
3U5F|1|6|A|898
3U5F|1|6|G|899
*
3U5F|1|6|C|910
3U5F|1|6|U|911
3U5F|1|6|U|912
3U5F|1|6|G|913
3U5F|1|6|G|914
3U5F|1|6|A|915
3U5F|1|6|U|916
3U5F|1|6|U|917

Current chains

Chain 6

18S rRNA

Nearby chains