IL_3UMY_002

3D structure

PDB id

3UMY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

1.9 Å

Loop

Sequence

GCGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_94403.7

Basepair signature

cWW-L-L-tWH-L-L-L-cWW

Number of instances in this motif group

4

Unit IDs

3UMY|1|B|G|2110
3UMY|1|B|C|2111
3UMY|1|B|G|2112
3UMY|1|B|U|2113
3UMY|1|B|A|2114
3UMY|1|B|G|2115
3UMY|1|B|G|2116
3UMY|1|B|A|2117
3UMY|1|B|U|2118
3UMY|1|B|A|2119
3UMY|1|B|G|2120
*
3UMY|1|B|C|2178
3UMY|1|B|C|2179

Current chains

Chain B

RNA (80-MER)

Nearby chains

Chain A

50S ribosomal protein L1