IL_3UMY_004

3D structure

PDB id

3UMY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

1.9 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

3UMY|1|B|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48918.3

Basepair signature

cWW-tSH-tSH-tHS-tSS-R-cWW

Number of instances in this motif group

4

Unit IDs

3UMY|1|B|C|2129
3UMY|1|B|U|2130
3UMY|1|B|G|2131
3UMY|1|B|U|2132
3UMY|1|B|G|2133
3UMY|1|B|A|2134
3UMY|1|B|A|2135
3UMY|1|B|C|2136
*
3UMY|1|B|G|2155
3UMY|1|B|G|2156
3UMY|1|B|G|2157
3UMY|1|B|A|2158
3UMY|1|B|G|2159

Current chains

Chain B

RNA (80-MER)

Nearby chains

Chain A

50S ribosomal protein L1